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LOC_Os12g03740


Description : OsFBX438 - F-box domain containing protein, expressed


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g03740
Cluster HCCA clusters: cluster_0135

Target Alias Description ECC score Gene Family Method Actions
A4A49_31344 No alias f-box protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G021480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00001_0190 kfl00001_0190_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00005204-RA No alias (at2g02240 : 157.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
Seita.1G361500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G062500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G340500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 124 297
No external refs found!