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Description : zinc finger, C3HC4 type domain containing protein
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os12g04090 | |
| Cluster | HCCA clusters: cluster_0132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g34010 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G053210 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g02670 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g04450 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00032072-RA | No alias | (at3g56580 : 108.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.001G231000 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.002G083001 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.006G217600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.015G127600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.019G086500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G054700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.4G253600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.8G172700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G074600.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G224300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G199100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc09g059130 | No alias | LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Sopen08g021220 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_4465.8 | No alias | (at3g19950 : 80.5) RING/U-box superfamily protein;... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predicted GO |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Predicted GO |
| MF | GO:0008297 | single-stranded DNA exodeoxyribonuclease activity | IEP | Predicted GO |
| MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Predicted GO |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0035312 | 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| MF | GO:0045145 | single-stranded DNA 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 135 | 177 |
| No external refs found! |