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LOC_Os12g04220


Description : calcium-transporting ATPase, plasma membrane-type, putative, expressed


Gene families : OG_42_0000196 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g04220
Cluster HCCA clusters: cluster_0017

Target Alias Description ECC score Gene Family Method Actions
A4A49_09700 No alias calcium-transporting atpase 2, plasma membrane-type 0.02 Orthogroups_2024-Update
Bradi3g26890 No alias ATPase E1-E2 type family protein / haloacid... 0.02 Orthogroups_2024-Update
Brara.A02785.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.02 Orthogroups_2024-Update
Brara.K01023.1 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.02 Orthogroups_2024-Update
Glyma.07G004300 No alias autoinhibited Ca(2+)-ATPase 9 0.03 Orthogroups_2024-Update
HORVU6Hr1G030590.21 No alias P2B-type calcium cation-transporting ATPase *(ACA) 0.03 Orthogroups_2024-Update
Mp3g13160.1 No alias P2B-type calcium cation-transporting ATPase (ACA) 0.02 Orthogroups_2024-Update
Potri.014G016600 No alias autoinhibited Ca2+-ATPase 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR024750 Ca_ATPase_N_dom 8 52
IPR004014 ATPase_P-typ_cation-transptr_N 121 186
IPR006068 ATPase_P-typ_cation-transptr_C 841 1014
No external refs found!