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Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os12g04450 | |
| Cluster | HCCA clusters: cluster_0069 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_41488 | No alias | e3 ubiquitin-protein ligase rduf1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_41691 | No alias | e3 ubiquitin-protein ligase sdir1 | 0.03 | Orthogroups_2024-Update | |
| At1g26800 | No alias | E3 ubiquitin-protein ligase MPSR1... | 0.04 | Orthogroups_2024-Update | |
| At3g13228 | No alias | RING/U-box superfamily protein... | 0.02 | Orthogroups_2024-Update | |
| At3g30460 | No alias | RING/U-box superfamily protein... | 0.04 | Orthogroups_2024-Update | |
| At3g60080 | No alias | At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] | 0.03 | Orthogroups_2024-Update | |
| Bradi3g34010 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.G02768.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I03147.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Cre10.g422050 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| GRMZM2G169449 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G286700 | No alias | COP1-interacting protein 8 | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g58780 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g04690 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g04090 | No alias | zinc finger, C3HC4 type domain containing protein | 0.03 | Orthogroups_2024-Update | |
| MA_10267109g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| MA_10428335g0020 | No alias | (at3g19950 : 167.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_474338g0010 | No alias | (at2g39720 : 83.2) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| MA_79051g0010 | No alias | (at3g19950 : 171.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00032072-RA | No alias | (at3g56580 : 108.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056956-RA | No alias | (at2g40830 : 186.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| Potri.014G093500 | No alias | Protease-associated (PA) RING/U-box zinc finger family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s7_381V6 | No alias | abi3-interacting protein 2-1 protein | 0.01 | Orthogroups_2024-Update | |
| Seita.8G172700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc10g045180 | No alias | E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) | 0.02 | Orthogroups_2024-Update | |
| Sopen03g029300 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen05g014700 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen09g029310 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_4465.8 | No alias | (at3g19950 : 80.5) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
| BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
| BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
| BP | GO:0016049 | cell growth | IEP | Predicted GO |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
| CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
| BP | GO:0040007 | growth | IEP | Predicted GO |
| BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 132 | 160 |
| No external refs found! |