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  5. LOC_Os12g04880

LOC_Os12g04880


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g04880
Cluster HCCA clusters: cluster_0095

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G122960.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g19350 No alias retrotransposon, putative, centromere-specific, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000477 RT_dom 235 395
No external refs found!