Solyc01g090760

Description : GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC)

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g090760
Cluster	HCCA clusters: Cluster_272

Target	Alias	Description	ECC score	Gene Family Method
405209	No alias	GATA transcription factor 20	0.04	Orthogroups_2024-Update
A4A49_09786	No alias	gata transcription factor 2	0.03	Orthogroups_2024-Update
A4A49_15410	No alias	gata transcription factor 12	0.02	Orthogroups_2024-Update
At4g36620	No alias	GATA transcription factor 19...	0.03	Orthogroups_2024-Update
At5g26930	No alias	GATA transcription factor 23...	0.04	Orthogroups_2024-Update
Bradi2g35057	No alias	GATA transcription factor 23	0.03	Orthogroups_2024-Update
Bradi3g08240	No alias	GATA type zinc finger transcription factor family protein	0.04	Orthogroups_2024-Update
Bradi3g33200	No alias	GATA transcription factor 4	0.02	Orthogroups_2024-Update
Bradi4g41570	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
Brara.A02105.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.B03483.1	No alias	transcription factor *(A/B-GATA)	0.05	Orthogroups_2024-Update
Brara.C04334.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.F00491.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
GRMZM2G009530	No alias	GATA transcription factor 12	0.02	Orthogroups_2024-Update
GRMZM2G031983	No alias	GATA type zinc finger transcription factor family protein	0.03	Orthogroups_2024-Update
GRMZM2G054615	No alias	GATA transcription factor 5	0.02	Orthogroups_2024-Update
GRMZM2G379005	No alias	GATA transcription factor 12	0.03	Orthogroups_2024-Update
Glyma.17G228700	No alias	cytokinin-responsive gata factor 1	0.02	Orthogroups_2024-Update
Glyma.20G180100	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
HORVU6Hr1G088370.6	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
HORVU7Hr1G086810.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
LOC_Os01g24070	No alias	GATA zinc finger domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_103421g0030	No alias	(at5g66320 : 154.0) Encodes GATA transcription factor...	0.04	Orthogroups_2024-Update
MA_10434815g0010	No alias	(at2g45050 : 142.0) Encodes a member of the GATA factor...	0.04	Orthogroups_2024-Update
MA_82238g0030	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00003833-RA	No alias	(at5g25830 : 159.0) Encodes a member of the GATA factor...	0.02	Orthogroups_2024-Update
PSME_00026073-RA	No alias	(at5g66320 : 163.0) Encodes GATA transcription factor...	0.04	Orthogroups_2024-Update
PSME_00046739-RA	No alias	(at2g45050 : 155.0) Encodes a member of the GATA factor...	0.04	Orthogroups_2024-Update
PSME_00051947-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Pp1s241_7V6	No alias	F26P21.10; zinc finger (GATA type) family protein...	0.02	Orthogroups_2024-Update
Seita.3G175200.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.004G301100.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.006G162800.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sopen01g052460	No alias	GATA zinc finger	0.03	Orthogroups_2024-Update
Sopen02g013380	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update
evm.model.tig00000219.19	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
evm.model.tig00020610.74	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	167	201

External Links

No external refs found!

Solyc01g090760

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation