Description : RING-H2 finger protein, putative, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os12g05370 | |
Cluster | HCCA clusters: cluster_0107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_20151 | No alias | putative ring-h2 finger protein atl61 | 0.02 | Orthogroups_2024-Update | |
At1g35330 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] | 0.02 | Orthogroups_2024-Update | |
At1g53820 | No alias | RING-H2 finger protein ATL60... | 0.03 | Orthogroups_2024-Update | |
At3g62690 | No alias | RING-H2 zinc finger protein ATL5... | 0.03 | Orthogroups_2024-Update | |
At5g10380 | No alias | E3 ubiquitin-protein ligase RING1... | 0.03 | Orthogroups_2024-Update | |
Brara.B02994.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.F02551.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Glyma.09G140800 | No alias | carbon/nitrogen insensitive 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.14G058000 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G212000 | No alias | AtL5 | 0.03 | Orthogroups_2024-Update | |
HORVU0Hr1G016510.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G069960.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G082740.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Kfl00495_0060 | kfl00495_0060_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g45060 | No alias | RING-H2 finger protein ATL2M, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g05300 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_17362g0010 | No alias | (at5g06490 : 90.5) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Mp8g15250.1 | No alias | RING-H2-class E3 ligase | 0.02 | Orthogroups_2024-Update | |
Potri.010G243300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.1G004900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc01g081040 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006417 | regulation of translation | IEP | Predicted GO |
BP | GO:0006448 | regulation of translational elongation | IEP | Predicted GO |
BP | GO:0006449 | regulation of translational termination | IEP | Predicted GO |
BP | GO:0006452 | translational frameshifting | IEP | Predicted GO |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Predicted GO |
BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
BP | GO:0043243 | positive regulation of protein complex disassembly | IEP | Predicted GO |
BP | GO:0043244 | regulation of protein complex disassembly | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0045727 | positive regulation of translation | IEP | Predicted GO |
BP | GO:0045901 | positive regulation of translational elongation | IEP | Predicted GO |
BP | GO:0045905 | positive regulation of translational termination | IEP | Predicted GO |
BP | GO:0048518 | positive regulation of biological process | IEP | Predicted GO |
BP | GO:0048522 | positive regulation of cellular process | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 108 | 151 |
No external refs found! |