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  5. Solyc09g010140

Solyc09g010140


Description : Senescence regulator (AHRD V3.3 *** A0A103Y6R7_CYNCS)


Gene families : OG_42_0000208 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g010140
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
442846 No alias Protein of unknown function, DUF584 0.03 Orthogroups_2024-Update
At2g34340 No alias At2g34340 [Source:UniProtKB/TrEMBL;Acc:O80783] 0.02 Orthogroups_2024-Update
Brara.C03553.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C04588.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F00783.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G291700 No alias Protein of unknown function, DUF584 0.04 Orthogroups_2024-Update
Glyma.10G053200 No alias Protein of unknown function, DUF584 0.04 Orthogroups_2024-Update
Glyma.12G172300 No alias Protein of unknown function, DUF584 0.03 Orthogroups_2024-Update
Glyma.17G013300 No alias Protein of unknown function, DUF584 0.04 Orthogroups_2024-Update
HORVU0Hr1G005210.2 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_158445g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_431548g0010 No alias (at4g21970 : 103.0) Protein of unknown function, DUF584;... 0.04 Orthogroups_2024-Update
Sobic.002G001900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G149700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g083260 No alias LOW QUALITY:senescence regulator (Protein of unknown... 0.03 Orthogroups_2024-Update
Sopen09g002630 No alias Senescence regulator 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 44 182
No external refs found!