LOC_Os12g06570

Description : cyclic nucleotide-gated ion channel, putative, expressed

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os12g06570
Cluster	HCCA clusters: cluster_0125

Target	Alias	Description	ECC score	Gene Family Method
At2g24610	No alias	cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610]	0.02	Orthogroups_2024-Update
At2g46440	No alias	Cyclic nucleotide-gated ion channel 11...	0.02	Orthogroups_2024-Update
At3g17700	No alias	Probable cyclic nucleotide-gated ion channel 20,...	0.02	Orthogroups_2024-Update
Glyma.16G025400	No alias	cyclic nucleotide-gated channel 13	0.02	Orthogroups_2024-Update
Kfl00018_0440	kfl00018_0440_v1.1	(at4g30360 : 523.0) member of Cyclic nucleotide gated...	0.01	Orthogroups_2024-Update
Potri.015G033900	No alias	cyclic nucleotide-binding transporter 1	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	390	479
IPR005821	Ion_trans_dom	10	294

External Links

No external refs found!