1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g06610

LOC_Os12g06610


Description : nucleolar complex protein 2, putative, expressed


Gene families : OG_42_0002326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g06610
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
Bradi3g29890 No alias Noc2p family 0.03 Orthogroups_2024-Update
Bradi4g01080 No alias Noc2p family 0.03 Orthogroups_2024-Update
Brara.G00202.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.02 Orthogroups_2024-Update
Brara.I03803.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.04 Orthogroups_2024-Update
Cre09.g391652 No alias Noc2p family 0.02 Orthogroups_2024-Update
Glyma.17G186500 No alias Noc2p family 0.03 Orthogroups_2024-Update
Mp1g23860.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.02 Orthogroups_2024-Update
Potri.001G012800 No alias Noc2p family 0.03 Orthogroups_2024-Update
Potri.008G043400 No alias Noc2p family 0.03 Orthogroups_2024-Update
Seita.4G210700.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.03 Orthogroups_2024-Update
Sobic.005G028100.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.03 Orthogroups_2024-Update
Solyc02g081680 No alias Nucleolar complex protein 2 like (AHRD V3.3 *** A0A0B2RJJ2_GLYSO) 0.03 Orthogroups_2024-Update
Solyc05g023710 No alias Nucleolar complex protein 2 isoform 2 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
evm.model.contig_3494.9 No alias (at2g18220 : 99.0) Noc2p family; INVOLVED IN:... 0.01 Orthogroups_2024-Update
evm.model.tig00020610.71 No alias (at2g18220 : 250.0) Noc2p family; INVOLVED IN:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005343 Noc2 369 661
No external refs found!