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  5. LOC_Os12g06660

LOC_Os12g06660


Description : actin, putative, expressed


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g06660
Cluster HCCA clusters: cluster_0065

Target Alias Description ECC score Gene Family Method Actions
Brara.D02290.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
GRMZM2G104017 No alias actin 7 0.02 Orthogroups_2024-Update
Pp1s337_26V6 No alias MYH9.2; ACTIN 2/7 (sp|P53492) [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 380
No external refs found!