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  5. LOC_Os12g07610

LOC_Os12g07610


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g07610
Cluster HCCA clusters: cluster_0014

Target Alias Description ECC score Gene Family Method Actions
80553 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Brara.A03530.1 No alias R1R2R3-MYB transcription factor 0.02 Orthogroups_2024-Update
Brara.K00691.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
GRMZM2G428555 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Glyma.03G082400 No alias myb domain protein 3r-5 0.02 Orthogroups_2024-Update
PSME_00010642-RA No alias (at1g26780 : 220.0) Encodes LOF1 (LATERAL ORGAN... 0.02 Orthogroups_2024-Update
Potri.017G017600 No alias myb domain protein 52 0.02 Orthogroups_2024-Update
Pp1s200_41V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.02 Orthogroups_2024-Update
Seita.5G043800.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Seita.8G101000.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Sopen09g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!