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  5. LOC_Os12g07640

LOC_Os12g07640


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g07640
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
A4A49_19615 No alias transcription repressor myb4 0.02 Orthogroups_2024-Update
Bradi3g37047 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Bradi3g48886 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Bradi3g56917 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G011422 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.03G183900 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.05G224300 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.10G059000 No alias myb domain protein 27 0.03 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_2026g0010 No alias (p20025|myb38_maize : 264.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
PSME_00035153-RA No alias (at3g02940 : 237.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Pp1s133_87V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.2G200200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g096200 No alias R2R3MYB transcription factor 6 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!