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LOC_Os12g07700


Description : nifU, putative, expressed


Gene families : OG_42_0002796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g07700
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
Bradi4g41260 No alias NIFU-like protein 2 0.01 Orthogroups_2024-Update
Sopen01g046120 No alias NifU-like domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
BP GO:0016226 iron-sulfur cluster assembly IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 80 145
IPR001075 NIF_FeS_clus_asmbl_NifU_C 161 222
No external refs found!