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  5. LOC_Os12g08090

LOC_Os12g08090


Description : amino acid transporter, putative, expressed


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g08090
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
90661 No alias amino acid permease 2 0.02 Orthogroups_2024-Update
A4A49_41622 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
At5g23810 No alias Probable amino acid permease 7... 0.03 Orthogroups_2024-Update
At5g49630 No alias AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7] 0.02 Orthogroups_2024-Update
Bradi1g45180 No alias amino acid permease 8 0.03 Orthogroups_2024-Update
Bradi4g41040 No alias amino acid permease 4 0.03 Orthogroups_2024-Update
Bradi5g13047 No alias amino acid permease 2 0.02 Orthogroups_2024-Update
Bradi5g24800 No alias amino acid permease 2 0.01 Orthogroups_2024-Update
Brara.B01675.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Brara.J02396.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Glyma.04G088200 No alias amino acid permease 6 0.02 Orthogroups_2024-Update
Glyma.14G144200 No alias amino acid permease 8 0.03 Orthogroups_2024-Update
LOC_Os07g04180 No alias amino acid transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g09020 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
MA_10058543g0010 No alias (at5g49630 : 237.0) Is a high affinity amino acid... 0.03 Orthogroups_2024-Update
Potri.005G181600 No alias amino acid permease 3 0.02 Orthogroups_2024-Update
Potri.009G085000 No alias amino acid permease 6 0.02 Orthogroups_2024-Update
Pp1s107_87V6 No alias amino acid permease 0.03 Orthogroups_2024-Update
Seita.6G169300.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Seita.8G065400.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.010G166500.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 34 464
No external refs found!