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  5. LOC_Os12g08260

LOC_Os12g08260


Description : dehydrogenase E1 component domain containing protein, expressed


Gene families : OG_42_0002696 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g08260
Cluster HCCA clusters: cluster_0028

Target Alias Description ECC score Gene Family Method Actions
169956 No alias Thiamin diphosphate-binding fold (THDP-binding)... 0.02 Orthogroups_2024-Update
A4A49_25158 No alias 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 0.02 Orthogroups_2024-Update
Cre12.g539900 No alias Thiamin diphosphate-binding fold (THDP-binding)... 0.02 Orthogroups_2024-Update
Glyma.04G243000 No alias Thiamin diphosphate-binding fold (THDP-binding)... 0.03 Orthogroups_2024-Update
Mp5g05520.1 No alias subunit alpha of E1 2-oxoisovalerate dehydrogenase subcomplex 0.02 Orthogroups_2024-Update
Pp1s207_68V6 No alias F24J8.4; 2-oxoisovalerate dehydrogenase, putative /... 0.03 Orthogroups_2024-Update
Solyc04g063350 No alias Pyruvate dehydrogenase E1 component subunit alpha (AHRD... 0.03 Orthogroups_2024-Update
evm.model.contig_2113.2 No alias (at1g21400 : 361.0) Thiamin diphosphate-binding fold... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001017 DH_E1 151 447
No external refs found!