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  5. LOC_Os12g09640

LOC_Os12g09640


Description : protein phosphatase 2C, putative, expressed


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g09640
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
Brara.C02062.1 No alias clade B phosphatase 0.02 Orthogroups_2024-Update
Brara.E00564.1 No alias clade B phosphatase 0.02 Orthogroups_2024-Update
MA_10429333g0010 No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.02 Orthogroups_2024-Update
PSME_00016672-RA No alias (at1g67820 : 293.0) Protein phosphatase 2C family... 0.03 Orthogroups_2024-Update
PSME_00023716-RA No alias (at2g30020 : 301.0) Encodes AP2C1. Belongs to the clade... 0.02 Orthogroups_2024-Update
Seita.8G081700.1 No alias clade B phosphatase 0.02 Orthogroups_2024-Update
Seita.9G440500.1 No alias clade B phosphatase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 142 408
No external refs found!