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  5. Solyc09g010680

Solyc09g010680


Description : Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g010680
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
A4A49_15151 No alias dof zinc finger protein dof2.4 0.04 Orthogroups_2024-Update
Glyma.06G131500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G087800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Sobic.001G034300.3 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 84 139
No external refs found!