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  5. Solyc09g010860

Solyc09g010860


Description : expansin precursor 4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g010860
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
At1g12560 No alias EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749] 0.05 Orthogroups_2024-Update
At4g01630 No alias EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2] 0.03 Orthogroups_2024-Update
At5g39270 No alias Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80] 0.04 Orthogroups_2024-Update
Bradi2g22290 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G034030.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
HORVU6Hr1G075970.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
LOC_Os03g31480 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g15840 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434805g0030 No alias (at2g40610 : 365.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Mp4g06560.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
Potri.002G184700 No alias expansin A17 0.02 Orthogroups_2024-Update
Pp1s191_27V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Sobic.004G121700.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc12g089380 No alias expansin 8 0.05 Orthogroups_2024-Update
Sopen02g032810 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 170 247
IPR009009 RlpA-like_DPBB 73 159
No external refs found!