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  5. Solyc09g011020

Solyc09g011020


Description : Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G02130.1)


Gene families : OG_42_0006390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g011020
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
438124 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 278 305
No external refs found!