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  5. Solyc09g011160

Solyc09g011160


Description : Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** AT3G53830.3)


Gene families : OG_42_0004022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g011160
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
A4A49_05912 No alias ultraviolet-b receptor uvr8 0.04 Orthogroups_2024-Update
Bradi2g54850 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Glyma.02G250700 No alias Regulator of chromosome condensation (RCC1) family protein 0.06 Orthogroups_2024-Update
Glyma.07G136500 No alias Regulator of chromosome condensation (RCC1) family protein 0.06 Orthogroups_2024-Update
Glyma.11G223000 No alias Regulator of chromosome condensation (RCC1) family protein 0.05 Orthogroups_2024-Update
Glyma.14G066000 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
Glyma.18G034600 No alias Regulator of chromosome condensation (RCC1) family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G085860.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen09g005910 No alias Regulator of chromosome condensation (RCC1) repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 386 437
IPR000408 Reg_chr_condens 254 330
IPR000408 Reg_chr_condens 334 382
IPR000408 Reg_chr_condens 443 489
No external refs found!