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  5. LOC_Os12g17550

LOC_Os12g17550


Description : expressed protein


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g17550
Cluster HCCA clusters: cluster_0087

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18400 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 85 167
IPR013210 LRR_N_plant-typ 324 361
IPR001611 Leu-rich_rpt 823 871
No external refs found!