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Description : expressed protein
Gene families : OG_42_0005851 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005851_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os12g19040 | |
| Cluster | HCCA clusters: cluster_0144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g39027 | No alias | sphere organelles protein-related | 0.04 | Orthogroups_2024-Update | |
| Glyma.11G243800 | No alias | sphere organelles protein-related | 0.04 | Orthogroups_2024-Update | |
| Glyma.18G013300 | No alias | sphere organelles protein-related | 0.03 | Orthogroups_2024-Update | |
| MA_10430448g0010 | No alias | (at1g13030 : 96.7) sphere organelles protein-related;... | 0.03 | Orthogroups_2024-Update | |
| MA_10431309g0010 | No alias | (at1g13030 : 109.0) sphere organelles protein-related;... | 0.03 | Orthogroups_2024-Update | |
| Seita.3G311200.1 | No alias | scaffold factor *(COILIN) of Cajal body formation | 0.04 | Orthogroups_2024-Update | |
| Sobic.006G059500.1 | No alias | scaffold factor *(COILIN) of Cajal body formation | 0.02 | Orthogroups_2024-Update | |
| Solyc05g013740 | No alias | Coilin-like protein (AHRD V3.3 *-* U6BQ51_NICBE) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g008660 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00020930.21 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |