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  5. LOC_Os12g20169

LOC_Os12g20169


Description : retrotransposon protein, putative, Ty3-gypsy subclass, expressed


Gene families : OG_42_0113612 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g20169
Cluster HCCA clusters: cluster_0002


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005213 HGWP_repeat 421 442
IPR005213 HGWP_repeat 293 320
IPR005213 HGWP_repeat 361 387
IPR005213 HGWP_repeat 451 478
IPR005213 HGWP_repeat 205 231
IPR019557 AminoTfrase-like_pln_mobile 114 170
IPR010811 DUF1409 990 1036
No external refs found!