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  5. LOC_Os12g24170

LOC_Os12g24170


Description : beta-galactosidase precursor, putative, expressed


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g24170
Cluster HCCA clusters: cluster_0020

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08180 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Brara.C02409.1 No alias beta-galactosidase *(BGAL8) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.E02743.1 No alias beta-galactosidase *(BGAL1) 0.02 Orthogroups_2024-Update
Glyma.08G111000 No alias beta galactosidase 9 0.02 Orthogroups_2024-Update
Glyma.09G062900 No alias beta-galactosidase 12 0.02 Orthogroups_2024-Update
Glyma.13G350700 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
Glyma.15G169500 No alias beta-galactosidase 12 0.02 Orthogroups_2024-Update
HORVU3Hr1G081980.7 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G074280.4 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU6Hr1G039490.14 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_72251g0010 No alias (at2g28470 : 966.0) putative beta-galactosidase (BGAL8... 0.02 Orthogroups_2024-Update
PSME_00025599-RA No alias (at5g63810 : 95.1) member of Glycoside Hydrolase Family... 0.02 Orthogroups_2024-Update
Pp1s10_144V6 No alias beta-galactosidase 0.02 Orthogroups_2024-Update
Seita.1G033600.1 No alias beta-galactosidase *(BGAL1) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc03g121540 No alias beta-galactosidase 3 0.02 Orthogroups_2024-Update
Sopen01g052190 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen03g040350 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update
Sopen07g018350 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 838 914
IPR031330 Gly_Hdrlase_35_cat 71 383
No external refs found!