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  5. Solyc09g011780

Solyc09g011780


Description : R2R3MYB transcription factor 1


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g011780
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Brara.D01385.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G228700 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
LOC_Os09g01960 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10425867g0020 No alias (at1g69560 : 184.0) Encodes LOF2 (LATERAL ORGAN... 0.02 Orthogroups_2024-Update
Mp1g08640.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
Mp3g09350.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00014514-RA No alias (at4g32730 : 92.8) Encodes a putative c-myb-like... 0.03 Orthogroups_2024-Update
Potri.010G195000 No alias myb domain protein 109 0.03 Orthogroups_2024-Update
Sopen03g028980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
evm.model.tig00021179.79 No alias (at5g58850 : 114.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 119 163
IPR001005 SANT/Myb 67 112
No external refs found!