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  5. LOC_Os12g25690

LOC_Os12g25690


Description : UDP-glucose 6-dehydrogenase, putative, expressed


Gene families : OG_42_0001302 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g25690
Cluster HCCA clusters: cluster_0113

Target Alias Description ECC score Gene Family Method Actions
Brara.B00604.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Brara.D00947.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Brara.J01951.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.03 Orthogroups_2024-Update
Cre06.g278185 No alias UDP-glucose dehydrogenase 1 0.01 Orthogroups_2024-Update
Cre07.g357200 No alias UDP-glucose dehydrogenase 1 0.01 Orthogroups_2024-Update
Glyma.05G022600 No alias UDP-glucose 6-dehydrogenase family protein 0.02 Orthogroups_2024-Update
Pp1s334_84V6 No alias udp-glucose dehydrogenase 0.02 Orthogroups_2024-Update
Pp1s365_31V6 No alias udp-glucose dehydrogenase 0.03 Orthogroups_2024-Update
Seita.2G003000.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.02 Orthogroups_2024-Update
evm.model.contig_542.12 No alias (at5g39320 : 603.0) UDP-glucose 6-dehydrogenase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR014026 UDP-Glc/GDP-Man_DH_dimer 210 304
IPR001732 UDP-Glc/GDP-Man_DH_N 3 186
IPR014027 UDP-Glc/GDP-Man_DH_C 328 451
No external refs found!