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  5. Solyc09g011960

Solyc09g011960


Description : Laccase (AHRD V3.3 *** A0A067L6R3_JATCU)


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g011960
Cluster HCCA clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
A4A49_15209 No alias laccase-4 0.03 Orthogroups_2024-Update
At1g18140 No alias Laccase-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMS3] 0.04 Orthogroups_2024-Update
At2g38080 No alias Laccase-4 [Source:UniProtKB/Swiss-Prot;Acc:O80434] 0.03 Orthogroups_2024-Update
At5g58910 No alias laccase 16 [Source:TAIR;Acc:AT5G58910] 0.02 Orthogroups_2024-Update
Bradi2g54690 No alias laccase 17 0.03 Orthogroups_2024-Update
Glyma.02G224800 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.08G359100 No alias laccase 17 0.03 Orthogroups_2024-Update
Glyma.11G137500 No alias laccase 2 0.04 Orthogroups_2024-Update
Glyma.18G065100 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
PSME_00010271-RA No alias (at5g05390 : 664.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.02 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.006G096900 No alias Laccase/Diphenol oxidase family protein 0.02 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.02 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.015G040700 No alias laccase 1 0.03 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.02 Orthogroups_2024-Update
Potri.016G112000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Pp1s86_61V6 No alias laccase (diphenol oxidase)-like protein 0.02 Orthogroups_2024-Update
Solyc05g052340 No alias Laccase (AHRD V3.3 *** K4C1R5_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 158 308
IPR011707 Cu-oxidase_3 33 146
IPR011706 Cu-oxidase_2 429 552
No external refs found!