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  5. Solyc09g011970

Solyc09g011970


Description : Laccase (AHRD V3.3 *** B9HBT3_POPTR)


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g011970
Cluster HCCA clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
80214 No alias laccase 12 0.03 Orthogroups_2024-Update
A4A49_05486 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_15209 No alias laccase-4 0.05 Orthogroups_2024-Update
A4A49_18512 No alias laccase-3 0.03 Orthogroups_2024-Update
A4A49_20277 No alias laccase-11 0.03 Orthogroups_2024-Update
A4A49_27562 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_34983 No alias laccase-4 0.03 Orthogroups_2024-Update
A4A49_60652 No alias laccase-5 0.03 Orthogroups_2024-Update
A4A49_64623 No alias laccase-5 0.04 Orthogroups_2024-Update
At2g30210 No alias Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0] 0.04 Orthogroups_2024-Update
At5g60020 No alias Laccase-17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD5] 0.04 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.03 Orthogroups_2024-Update
Brara.B00173.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.D02326.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Brara.E01368.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Glyma.18G177200 No alias laccase 17 0.03 Orthogroups_2024-Update
HORVU1Hr1G072470.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
HORVU3Hr1G086160.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
LOC_Os01g62490 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.009G034500 No alias laccase 2 0.03 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.03 Orthogroups_2024-Update
Sopen02g029800 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 430 562
IPR001117 Cu-oxidase 167 318
IPR011707 Cu-oxidase_3 41 155
No external refs found!