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  5. LOC_Os12g31810

LOC_Os12g31810


Description : cyclin, putative, expressed


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g31810
Cluster HCCA clusters: cluster_0080

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.02 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.02 Orthogroups_2024-Update
At3g11520 No alias Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] 0.03 Orthogroups_2024-Update
At4g35620 No alias Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] 0.03 Orthogroups_2024-Update
At5g11300 No alias Cyclin-A2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q147G5] 0.02 Orthogroups_2024-Update
Bradi4g06827 No alias CYCLIN A2;3 0.02 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Brara.B02504.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
Glyma.04G043350 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
HORVU4Hr1G013320.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
HORVU5Hr1G006970.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g41390 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g39210 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00044357-RA No alias (at1g76310 : 301.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update
Potri.006G247200 No alias cyclin a2;1 0.02 Orthogroups_2024-Update
Potri.009G093100 No alias CYCLIN A3;4 0.03 Orthogroups_2024-Update
Seita.5G352700.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.03 Orthogroups_2024-Update
Solyc10g049360 No alias cyclin A3_6 0.03 Orthogroups_2024-Update
Sopen11g001090 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen12g030500 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 359 481
IPR006671 Cyclin_N 230 356
No external refs found!