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  5. LOC_Os12g35410

LOC_Os12g35410


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g35410
Cluster HCCA clusters: cluster_0101

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G109000 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.19G051300 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Seita.3G310800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G140900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g032810 No alias LOW QUALITY:Helicase-like protein (AHRD V3.3 *-* Q9AYF0_ORYSJ) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 460 642
No external refs found!