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  5. LOC_Os12g37690

LOC_Os12g37690


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g37690
Cluster HCCA clusters: cluster_0111

Target Alias Description ECC score Gene Family Method Actions
A4A49_27195 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
A4A49_34066 No alias transcription factor rax3 0.02 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
At4g09460 No alias Transcription repressor MYB6... 0.04 Orthogroups_2024-Update
At4g34990 No alias Transcription factor MYB32... 0.03 Orthogroups_2024-Update
At5g40330 No alias Transcription factor MYB23... 0.02 Orthogroups_2024-Update
Bradi1g64140 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi1g64687 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Bradi3g37047 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.06 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01882.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00102.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.03 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.01 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G041415 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G431156 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.03G163100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.06G312900 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Glyma.08G336500 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.10G059000 No alias myb domain protein 27 0.02 Orthogroups_2024-Update
Glyma.13G061900 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
Glyma.13G187500 No alias myb domain protein 33 0.02 Orthogroups_2024-Update
Glyma.19G038100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.04 Orthogroups_2024-Update
HORVU1Hr1G045090.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G023510.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
Kfl00493_0040 kfl00493_0040_v1.1 (at2g32460 : 155.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_128244g0010 No alias (at3g61250 : 275.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_175772g0010 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_19163g0010 No alias (p20026|myb1_horvu : 256.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.002G096800 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.009G061500 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.013G056400 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G133700.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc01g079620 No alias colorless fruit epidermis 0.02 Orthogroups_2024-Update
Solyc04g074170 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.02 Orthogroups_2024-Update
Sopen06g030050 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen09g003070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_444.1 No alias (at5g02320 : 125.0) Encodes a putative c-MYB-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 112 155
IPR001005 SANT/Myb 59 106
No external refs found!