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  5. LOC_Os12g38310

LOC_Os12g38310


Description : mitochondrial import inner membrane translocase subunit Tim, putative, expressed


Gene families : OG_42_0004296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g38310
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
At3g46560 No alias Mitochondrial import inner membrane translocase subunit... 0.03 Orthogroups_2024-Update
Bradi4g04290 No alias Tim10/DDP family zinc finger protein 0.04 Orthogroups_2024-Update
Cre01.g033400 No alias Tim10/DDP family zinc finger protein 0.01 Orthogroups_2024-Update
Glyma.11G139400 No alias Tim10/DDP family zinc finger protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G021140.1 No alias component *(Tim9) of inner mitochondrion membrane TIM22... 0.05 Orthogroups_2024-Update
Potri.012G039100 No alias Tim10/DDP family zinc finger protein 0.03 Orthogroups_2024-Update
Pp1s178_121V6 No alias mitochondrial import inner membrane translocase subunit tim9 0.06 Orthogroups_2024-Update
Sobic.001G533500.1 No alias component *(Tim9) of inner mitochondrion membrane TIM22... 0.05 Orthogroups_2024-Update
Solyc10g086510 No alias Mitochondrial import inner membrane translocase subunit... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004217 Tim10-like 24 84
No external refs found!