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LOC_Os12g40080


Description : B3 DNA binding domain containing protein, expressed


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g40080
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14550 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G012170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G017820.1 No alias REM-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G372700.1 No alias REM-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.008G148600.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 400 486
IPR003340 B3_DNA-bd 27 113
IPR003340 B3_DNA-bd 242 323
No external refs found!