Description : auxin response factor, putative, expressed
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os12g41950 | |
Cluster | HCCA clusters: cluster_0068 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D00084.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Glyma.08G027800 | No alias | Transcriptional factor B3 family protein /... | 0.03 | Orthogroups_2024-Update | |
PSME_00015886-RA | No alias | (at1g30330 : 314.0) Encodes a member of the auxin... | 0.03 | Orthogroups_2024-Update | |
Sobic.003G251700.1 | No alias | ARF-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Solyc01g103050 | No alias | Auxin Response Factor 1 | 0.02 | Orthogroups_2024-Update | |
Solyc03g118290 | No alias | auxin response factor 2A | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
BP | GO:0009725 | response to hormone | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Predicted GO |
BP | GO:0010639 | negative regulation of organelle organization | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
MF | GO:0017069 | snRNA binding | IEP | Predicted GO |
MF | GO:0017070 | U6 snRNA binding | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0030623 | U5 snRNA binding | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0036260 | RNA capping | IEP | Predicted GO |
CC | GO:0042555 | MCM complex | IEP | Predicted GO |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0044092 | negative regulation of molecular function | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0051095 | regulation of helicase activity | IEP | Predicted GO |
BP | GO:0051097 | negative regulation of helicase activity | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051129 | negative regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Predicted GO |
BP | GO:0051346 | negative regulation of hydrolase activity | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Predicted GO |
BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | Predicted GO |
BP | GO:1905774 | regulation of DNA helicase activity | IEP | Predicted GO |
BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | Predicted GO |
BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predicted GO |
No external refs found! |