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  5. LOC_Os12g42250

LOC_Os12g42250


Description : ZOS12-10 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g42250
Cluster HCCA clusters: cluster_0045

Target Alias Description ECC score Gene Family Method Actions
A4A49_05911 No alias putative transcriptional regulator rabbit ears 0.02 Orthogroups_2024-Update
At1g24625 No alias Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266] 0.03 Orthogroups_2024-Update
At1g68360 No alias Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1] 0.02 Orthogroups_2024-Update
At3g23130 No alias Uncharacterized protein At3g23130 (Fragment)... 0.02 Orthogroups_2024-Update
At5g25160 No alias ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56] 0.02 Orthogroups_2024-Update
At5g57520 No alias Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261] 0.02 Orthogroups_2024-Update
Bradi1g58550 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g01450 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.D02553.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.F00793.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.H02087.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.K00484.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.K01136.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
GRMZM5G888196 No alias zinc-finger protein 1 0.03 Orthogroups_2024-Update
Glyma.01G036600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G029400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.02 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G127600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G100900 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Glyma.08G094200 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Glyma.08G356600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.09G107400 No alias zinc finger protein 8 0.04 Orthogroups_2024-Update
Glyma.10G273800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G135800 No alias telomerase activator1 0.02 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Kfl00662_0020 kfl00662_0020_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os04g08600 No alias ZOS4-05 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g14130 No alias ZOS5-05 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_114098g0010 No alias (at1g67030 : 81.3) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
MA_121523g0010 No alias (at1g66140 : 110.0) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
MA_424g0010 No alias (at5g48890 : 80.5) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
PSME_00004584-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.003G180600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G074400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Pp1s6_381V6 No alias FCAALL.130; zinc finger (C2H2 type) family protein... 0.01 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.5G090200.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.9G388200.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.9G388400.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G209800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Solyc05g009170 No alias Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR) 0.02 Orthogroups_2024-Update
Solyc06g061160 No alias LOW QUALITY:Zinc finger, C2H2 (AHRD V3.3 *** A0A103XFH7_CYNCS) 0.03 Orthogroups_2024-Update
Sopen09g024930 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!