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Description : DNA binding protein, putative, expressed
Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os12g43880 | |
| Cluster | HCCA clusters: cluster_0010 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g10830 | No alias | Core-2/I-branching... | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G110395 | No alias | Core-2/I-branching... | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G044500 | No alias | Core-2/I-branching... | 0.02 | Orthogroups_2024-Update | |
| Potri.006G233400 | No alias | Core-2/I-branching... | 0.02 | Orthogroups_2024-Update | |
| Seita.6G010700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.6G016700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G106000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G188100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc03g119260 | No alias | Core-2/I-branching... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEA | InterProScan predictions |
| CC | GO:0016020 | membrane | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
| MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003406 | Glyco_trans_14 | 138 | 365 |
| No external refs found! |