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  5. LOC_Os12g44060

LOC_Os12g44060


Description : nodulin, putative, expressed


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g44060
Cluster HCCA clusters: cluster_0089

Target Alias Description ECC score Gene Family Method Actions
79408 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G106960.3 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
PSME_00046657-RA No alias (at2g39210 : 308.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00051277-RA No alias (at2g39210 : 629.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
Seita.3G405800.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Sobic.005G209800.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Sopen03g032380 No alias Nodulin-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 17 269
No external refs found!