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  5. LOC_Os12g44180

LOC_Os12g44180


Description : nodulin, putative, expressed


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g44180
Cluster HCCA clusters: cluster_0003

Target Alias Description ECC score Gene Family Method Actions
79408 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
A4A49_21347 No alias protein nuclear fusion defective 4 0.02 Orthogroups_2024-Update
Bradi1g12440 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Brara.F01340.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update
Brara.G02260.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
GRMZM2G097395 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G276600 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G276800 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G158200 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G112900 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G113000 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G106960.3 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
LOC_Os10g08850 No alias nodulin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g29950 No alias nodulin, putative, expressed 0.02 Orthogroups_2024-Update
MA_116104g0010 No alias (at2g39210 : 585.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Mp5g19920.1 No alias anion transporter (Fabaceae-N70) 0.01 Orthogroups_2024-Update
PSME_00034985-RA No alias (at2g39210 : 444.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Solyc11g008200 No alias LOW QUALITY:Major facilitator superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc11g066330 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 6 254
IPR011701 MFS 318 512
No external refs found!