1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g021400

Cre01.g021400


Description : CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor


Gene families : OG_42_0004755 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004755_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre01.g021400
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
MA_112342g0010 No alias (at2g44200 : 213.0) CBF1-interacting co-repressor CIR,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019339 CIR_N_dom 13 48
IPR022209 CWC25 66 161
No external refs found!