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  5. Cre01.g048900

Cre01.g048900


Description : bromodomain and extraterminal domain protein 10


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre01.g048900
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
At5g46550 No alias Transcription factor GTE12... 0.02 Orthogroups_2024-Update
Bradi3g14160 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
GRMZM2G010075 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Kfl00261_0010 kfl00261_0010_v1.1 (at3g52280 : 149.0) Bromodomain containing... 0.02 Orthogroups_2024-Update
Potri.012G094300 No alias nuclear protein X1 0.03 Orthogroups_2024-Update
Potri.015G091800 No alias nuclear protein X1 0.03 Orthogroups_2024-Update
Potri.019G090700 No alias global transcription factor group E4 0.02 Orthogroups_2024-Update
Solyc02g093880 No alias Transcription factor GTE8 (AHRD V3.3 *** A0A0B2PTJ0_GLYSO) 0.01 Orthogroups_2024-Update
evm.model.tig00000632.12 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0031418 L-ascorbic acid binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 37 109
No external refs found!