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  5. Solyc09g031650

Solyc09g031650


Description : RING/U-box superfamily protein (AHRD V3.3 --* AT3G58030.4)


Gene families : OG_42_0009051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g031650
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G228800 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.12G007800 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.4G217000.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!