Solyc09g031710

Description : LOW QUALITY:Transposon protein, putative, Pong sub-class (AHRD V3.3 *-* Q10J52_ORYSJ)

Gene families : OG_42_0000670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc09g031710
Cluster	HCCA clusters: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os01g27580	No alias	transposon protein, putative, Pong sub-class, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g34400	No alias	transposon protein, putative, Pong sub-class, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Predicted GO
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Predicted GO
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Predicted GO
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006912	Harbinger_derived_prot	28	124

External Links

No external refs found!