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  4. Sequence
  5. Solyc09g031900

Solyc09g031900


Description : LOW QUALITY:auxin transport protein (BIG) (AHRD V3.3 --* AT3G02260.4)


Gene families : OG_42_0008685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008685_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc09g031900
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Potri.006G112600 No alias Function unknown 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!