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  5. Cre02.g118500

Cre02.g118500


Description : Coatomer, beta\' subunit


Gene families : OG_42_0001146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre02.g118500
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi1g51210 No alias Coatomer, beta\' subunit 0.03 Orthogroups_2024-Update
Bradi3g07926 No alias Coatomer, beta\' subunit 0.02 Orthogroups_2024-Update
Brara.H00818.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00819.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G036660.13 No alias subunit beta2 of coat protein complex 0.02 Orthogroups_2024-Update
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.03 Orthogroups_2024-Update
Potri.001G179200 No alias Coatomer, beta\' subunit 0.02 Orthogroups_2024-Update
Pp1s243_63V6 No alias coatomer beta 0.04 Orthogroups_2024-Update
Pp1s61_1V6 No alias coatomer beta 0.05 Orthogroups_2024-Update
Pp1s79_180V6 No alias coatomer beta 0.03 Orthogroups_2024-Update
Seita.1G040200.1 No alias subunit beta2 of coat protein complex 0.04 Orthogroups_2024-Update
Seita.4G227600.1 No alias subunit beta2 of coat protein complex 0.05 Orthogroups_2024-Update
Sobic.004G088450.1 No alias subunit beta2 of coat protein complex 0.01 Orthogroups_2024-Update
Sobic.010G178600.1 No alias subunit beta2 of coat protein complex 0.04 Orthogroups_2024-Update
Solyc06g066730 No alias Coatomer beta subunit, putative (AHRD V3.3 *** B9SQC0_RICCO) 0.04 Orthogroups_2024-Update
evm.model.contig_4516.1 No alias (at1g79990 : 963.0) structural molecules; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
evm.model.tig00020903.33 No alias (at1g79990 : 1008.0) structural molecules; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 178 215
IPR001680 WD40_repeat 132 171
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 220 256
IPR006692 Coatomer_WD-assoc_reg 319 762
No external refs found!