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  5. Cre02.g143600

Cre02.g143600


Description : SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Gene families : OG_42_0002266 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre02.g143600
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
438035 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.02 Orthogroups_2024-Update
Bradi1g19627 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.01 Orthogroups_2024-Update
HORVU2Hr1G025040.28 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.02 Orthogroups_2024-Update
Kfl00306_0110 kfl00306_0110_v1.1 (at3g06290 : 222.0) SAC3/GANP/Nin1/mts3/eIF-3 p25... 0.02 Orthogroups_2024-Update
Seita.2G412700.1 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.04 Orthogroups_2024-Update
Sobic.002G397500.2 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 Orthogroups_2024-Update
Sopen12g016080 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.01 Orthogroups_2024-Update
evm.model.tig00001278.20 No alias (at3g54380 : 83.6) SAC3/GANP/Nin1/mts3/eIF-3 p25 family;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3 514 837
No external refs found!