Cre03.g160300

Description : Ribosome associated membrane protein RAMP4

Gene families : OG_42_0002731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002731_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Chlamydomonas release: Cre03.g160300
Cluster	HCCA clusters: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
270498	No alias	Ribosome associated membrane protein RAMP4	0.02	Orthogroups_2024-Update
A4A49_07213	No alias	hypothetical protein	0.05	Orthogroups_2024-Update
Glyma.08G104900	No alias	Ribosome associated membrane protein RAMP4	0.02	Orthogroups_2024-Update
Seita.3G351800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Solyc11g012600	No alias	F-box/RNI-like superfamily protein (AHRD V3.3 --* AT2G17020.1)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003674	molecular_function	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010580	ER_stress-assoc	4	61

External Links

No external refs found!