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Description : Small nuclear ribonucleoprotein family protein
Gene families : OG_42_0006003 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006003_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Chlamydomonas release: Cre03.g164101 | |
| Cluster | HCCA clusters: Cluster_113 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.F03350.1 | No alias | component *(LSm7) of U6-associated LSm accessory... | 0.01 | Orthogroups_2024-Update | |
| evm.model.tig00020531.48 | No alias | (at2g03870 : 139.0) Small nuclear ribonucleoprotein... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Predicted GO |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006508 | proteolysis | IEP | Predicted GO |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Predicted GO |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Predicted GO |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| MF | GO:0015925 | galactosidase activity | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 11 | 82 |
| No external refs found! |