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  5. Cre04.g214501

Cre04.g214501


Description : polyribonucleotide nucleotidyltransferase, putative


Gene families : OG_42_0002046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre04.g214501
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G056650.13 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 Orthogroups_2024-Update
HORVU2Hr1G056710.5 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 Orthogroups_2024-Update
evm.model.tig00021073.40 No alias (at5g14580 : 307.0) polyribonucleotide... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 618 672
IPR001247 ExoRNase_PH_dom1 95 225
IPR001247 ExoRNase_PH_dom1 425 516
IPR015847 ExoRNase_PH_dom2 229 292
IPR015847 ExoRNase_PH_dom2 520 589
No external refs found!