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  5. Cre04.g216600

Cre04.g216600


Description : regulatory particle triple-A ATPase 6A


Gene families : OG_42_0003229 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre04.g216600
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At5g20000 No alias 26S proteasome regulatory subunit 8 homolog B... 0.02 Orthogroups_2024-Update
Bradi1g36830 No alias regulatory particle triple-A ATPase 6A 0.04 Orthogroups_2024-Update
Bradi3g07700 No alias regulatory particle triple-A ATPase 6A 0.02 Orthogroups_2024-Update
Brara.B00858.1 No alias regulatory component *(RPT6) of 26S proteasome 0.03 Orthogroups_2024-Update
Brara.J01595.1 No alias regulatory component *(RPT6) of 26S proteasome 0.02 Orthogroups_2024-Update
GRMZM2G107362 No alias regulatory particle triple-A ATPase 6A 0.02 Orthogroups_2024-Update
Glyma.07G002200 No alias regulatory particle triple-A ATPase 6A 0.02 Orthogroups_2024-Update
Kfl00020_0400 kfl00020_0400_v1.1 (at5g19990 : 667.0) 26S proteasome AAA-ATPase subunit;... 0.05 Orthogroups_2024-Update
MA_10427013g0010 No alias (at5g19990 : 730.0) 26S proteasome AAA-ATPase subunit;... 0.01 Orthogroups_2024-Update
Mp1g04290.1 No alias regulatory component RPT6 of 26S proteasome 0.03 Orthogroups_2024-Update
Potri.010G098300 No alias regulatory particle triple-A ATPase 6A 0.04 Orthogroups_2024-Update
Pp1s7016_1V6 No alias 26s protease regulatory 0.03 Orthogroups_2024-Update
Seita.1G042600.1 No alias regulatory component *(RPT6) of 26S proteasome 0.08 Orthogroups_2024-Update
Sobic.004G086600.1 No alias regulatory component *(RPT6) of 26S proteasome 0.08 Orthogroups_2024-Update
Solyc05g018570 No alias 26S protease regulatory subunit, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen05g015680 No alias ATPase family associated with various cellular activities (AAA) 0.04 Orthogroups_2024-Update
evm.model.tig00000792.28 No alias (at5g19990 : 630.0) 26S proteasome AAA-ATPase subunit;... 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 308
IPR032501 Prot_ATP_ID_OB 62 117
No external refs found!